EnhancerDB
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  3. rs16949474[chr17:48988805]
Enhancers that have rs16949474[chr17:48988805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16949474[chr17:48988805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48988516 48988861 ZNF143 GTRD no Epithelial (MCF-7) 21770714
chr17 48988792 48988806 POU4F1 JASPAR yes 54732684
chr17 48988792 48988808 POU4F3 JASPAR yes 54732685
chr17 48988797 48988807 HOXA13 JASPAR yes 54732686
Genes associated with rs16949474[chr17:48988805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 820960 Esophagus 0.235286 16024