EnhancerDB
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  3. rs16953228[chr15:55512909]
Enhancers that have rs16953228[chr15:55512909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs16953228[chr15:55512909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55512904 55512919 FOXP1 JASPAR yes 23494104
chr15 55512906 55512918 FOXC2 JASPAR yes 23494105
chr15 55512907 55512919 FOXI1 JASPAR yes 23494106
chr15 55512909 55512918 SRY JASPAR yes 23494107
Genes associated with rs16953228[chr15:55512909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More