EnhancerDB
  1. Home
  2. SNP
  3. rs17019438[chr1:212772937]
Enhancers that have rs17019438[chr1:212772937]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs17019438[chr1:212772937]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212772930 212772945 LEF1 JASPAR yes 35140089
chr1 212772931 212772945 TCF7L2 JASPAR yes 35140090
chr1 212772934 212772940 LEF1 TRANSFAC yes 35140091
chr1 212772934 212772940 TCF4 TRANSFAC yes 35140092
Genes associated with rs17019438[chr1:212772937], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 212458879 212535200 + PPP2R5A ENSG00000066027.7 212458879 237737 Ovary 0.404994 1825