EnhancerDB
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  3. rs17036420[chr1:117428250]
Enhancers that have rs17036420[chr1:117428250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs17036420[chr1:117428250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117425152 117428810 ZNF274 GTRD no Bone Marrow (K562) 21334101
chr1 117428074 117428399 ZNF143 GTRD no Epithelial (MCF-7) 21334105
chr1 117428239 117428254 FOXA1 JASPAR yes 31849063
chr1 117428240 117428255 FOXP1 JASPAR yes 31849064
chr1 117428241 117428252 FOXP2 JASPAR yes 31849065
chr1 117428241 117428255 FOXF2 JASPAR yes 31849066
chr1 117428242 117428250 FOXD1 JASPAR yes 31849067
chr1 117428242 117428250 FOXO3 JASPAR yes 31849068
chr1 117428243 117428250 FOXD2 JASPAR yes 31849069
chr1 117428243 117428250 FOXI1 JASPAR yes 31849070
chr1 117428243 117428250 FOXL1 JASPAR yes 31849071
chr1 117428243 117428250 FOXO4 JASPAR yes 31849072
chr1 117428243 117428250 FOXO6 JASPAR yes 31849073
chr1 117428243 117428250 FOXP3 JASPAR yes 31849074
chr1 117428243 117428251 FOXO3 JASPAR yes 31849075
chr1 117428243 117428254 FOXA1 JASPAR yes 31849076
Genes associated with rs17036420[chr1:117428250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More