EnhancerDB
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  3. rs17041017[chr12:109242378]
Enhancers that have rs17041017[chr12:109242378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17041017[chr12:109242378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109242367 109242387 TBX19 JASPAR yes 123626806
chr12 109242369 109242385 T JASPAR yes 123626808
chr12 109242372 109242385 ELF3 JASPAR yes 123626809
chr12 109242373 109242384 SPDEF JASPAR yes 123626810
Genes associated with rs17041017[chr12:109242378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More