EnhancerDB
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  3. rs1704397[chr15:42211992]
Enhancers that have rs1704397[chr15:42211992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1704397[chr15:42211992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42211981 42211992 SPDEF JASPAR yes 23005121
chr15 42211986 42212004 ESR1 JASPAR yes 23005122
chr15 42211988 42211999 E2F6 JASPAR yes 23005123
chr15 42211989 42211994 SP1 TRANSFAC yes 23005124
chr15 42211992 42211997 ETS2 TRANSFAC yes 23005125
Genes associated with rs1704397[chr15:42211992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More