EnhancerDB
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  3. rs17100547[chr12:65065608]
Enhancers that have rs17100547[chr12:65065608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17100547[chr12:65065608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65065601 65065615 POU4F1 JASPAR yes 121424312
chr12 65065601 65065617 POU4F3 JASPAR yes 121424313
chr12 65065602 65065618 POU4F2 JASPAR yes 121424314
chr12 65065602 65065618 POU4F3 JASPAR yes 121424315
chr12 65065604 65065608 YY1 TRANSFAC yes 121424316
chr12 65065607 65065611 YY1 TRANSFAC yes 121424317
chr12 65065607 65065617 HOXA13 JASPAR yes 121424318
chr12 65065607 65065617 HOXB13 JASPAR yes 121424319
chr12 65065607 65065617 HOXD13 JASPAR yes 121424320
chr12 65065607 65065618 HOXA10 JASPAR yes 121424321
chr12 65065608 65065617 CDX1 JASPAR yes 121424322
chr12 65065608 65065619 CDX2 JASPAR yes 121424323
Genes associated with rs17100547[chr12:65065608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More