EnhancerDB
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  3. rs17101857[chr12:66286940]
Enhancers that have rs17101857[chr12:66286940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 66278327 66298619 enh29659
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr12 66286698 66286979 vista13847
VISTA
Transcript factors that have rs17101857[chr12:66286940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66286551 66287015 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21553394
chr12 66286551 66287015 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108042667
chr12 66286640 66286950 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042668
chr12 66286654 66286969 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042669
chr12 66286685 66287061 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21553395
chr12 66286685 66287061 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108042670
chr12 66286698 66286954 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042671
chr12 66286698 66287054 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108042672
chr12 66286704 66286985 EP300 UCSC Txn Factor no Conserved 108042673
chr12 66286789 66287053 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21553396
chr12 66286789 66287053 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108042674
chr12 66286926 66286940 PAX6 JASPAR yes 82425296
chr12 66286926 66286940 PAX6 JASPAR yes 121502784
chr12 66286927 66286944 PAX1 JASPAR yes 82425298
chr12 66286927 66286944 PAX1 JASPAR yes 121502786
chr12 66286940 66286950 MZF1 JASPAR yes 82425299
chr12 66286940 66286950 MZF1 JASPAR yes 121502787
Genes associated with rs17101857[chr12:66286940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More