EnhancerDB
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  3. rs17162700[chr1:27972836]
Enhancers that have rs17162700[chr1:27972836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17162700[chr1:27972836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27972827 27972842 STAT1 JASPAR yes 27717699
chr1 27972833 27972842 ZEB1 JASPAR yes 27717700
chr1 27972834 27972851 RARA JASPAR yes 27717701
Genes associated with rs17162700[chr1:27972836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More