EnhancerDB
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  3. rs1716518[chr12:65049252]
Enhancers that have rs1716518[chr12:65049252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1716518[chr12:65049252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65049244 65049265 IRF1 JASPAR yes 121421651
chr12 65049245 65049266 IRF1 JASPAR yes 121421652
chr12 65049247 65049258 FOXC1 JASPAR yes 121421653
chr12 65049248 65049252 YY1 TRANSFAC yes 121421654
chr12 65049250 65049265 FOXP1 JASPAR yes 121421655
Genes associated with rs1716518[chr12:65049252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More