EnhancerDB
  1. Home
  2. SNP
  3. rs17176204[chr16:88830836]
Enhancers that have rs17176204[chr16:88830836]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17176204[chr16:88830836]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88830206 88831226 ZBTB33 GTRD no Lung (A549) 108223380
chr16 88830230 88830889 ZNF143 GTRD no Epithelial (MCF-7) 21736929
chr16 88830230 88830889 ZNF143 GTRD no Epithelial (MCF-7) 108223381
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 21736930
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 108223382
Genes associated with rs17176204[chr16:88830836], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88869621 88875666 + CDT1 ENSG00000167513.4 88869621 38785 Adrenal 0.386996 15163