EnhancerDB
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  3. rs17180093[chr6:29935997]
Enhancers that have rs17180093[chr6:29935997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs17180093[chr6:29935997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29935295 29936003 GATA1 UCSC Txn Factor no Conserved 108539463
chr6 29935991 29936005 POU4F1 JASPAR yes 101019148
chr6 29935991 29936006 HNF1A JASPAR yes 101019149
chr6 29935992 29936005 HNF1B JASPAR yes 101019150
Genes associated with rs17180093[chr6:29935997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More