EnhancerDB
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  3. rs17197540[chr6:31172044]
Enhancers that have rs17197540[chr6:31172044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 31167025 31180175 enh9031
Bone Marrow (K562) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs17197540[chr6:31172044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 31172030 31172045 FOXA1 JASPAR yes 101079308
chr6 31172031 31172046 FOXP1 JASPAR yes 101079309
chr6 31172034 31172045 FOXA1 JASPAR yes 101079321
chr6 31172041 31172059 SRF JASPAR yes 101079322
chr6 31172043 31172059 SRF JASPAR yes 101079323
chr6 31172043 31172061 SRF JASPAR yes 101079324
chr6 31172044 31172056 SRF JASPAR yes 101079325
Genes associated with rs17197540[chr6:31172044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More