EnhancerDB
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  3. rs17199778[chr5:79503611]
Enhancers that have rs17199778[chr5:79503611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79498686 79518535 enh22394
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs17199778[chr5:79503611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79503600 79503612 POU2F1 JASPAR yes 63706437
chr5 79503600 79503613 POU3F3 JASPAR yes 63706438
chr5 79503600 79503614 POU1F1 JASPAR yes 63706439
chr5 79503601 79503613 POU3F1 JASPAR yes 63706440
chr5 79503601 79503613 POU3F2 JASPAR yes 63706441
chr5 79503602 79503611 POU3F4 JASPAR yes 63706442
chr5 79503602 79503611 POU5F1B JASPAR yes 63706443
chr5 79503604 79503619 HNF1A JASPAR yes 63706444
chr5 79503605 79503618 HNF1B JASPAR yes 63706445
chr5 79503606 79503618 HNF1B JASPAR yes 63706446
chr5 79503608 79503618 HOXB2 JASPAR yes 63706447
chr5 79503608 79503618 HOXB3 JASPAR yes 63706448
chr5 79503608 79503618 MNX1 JASPAR yes 63706449
chr5 79503608 79503618 POU6F1 JASPAR yes 63706450
chr5 79503609 79503617 LMX1A JASPAR yes 63706451
chr5 79503609 79503617 LMX1B JASPAR yes 63706452
chr5 79503609 79503617 NKX6-1 JASPAR yes 63706453
chr5 79503609 79503617 NKX6-2 JASPAR yes 63706454
chr5 79503609 79503617 VAX1 JASPAR yes 63706455
chr5 79503609 79503617 VAX2 JASPAR yes 63706456
chr5 79503609 79503617 VSX1 JASPAR yes 63706457
chr5 79503609 79503617 VSX2 JASPAR yes 63706458
Genes associated with rs17199778[chr5:79503611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 78985700 79096063 + CMYA5 ENSG00000164309.10 78985700 407548 Stomach 0.124324 5493