EnhancerDB
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  3. rs17238206[chr15:55515340]
Enhancers that have rs17238206[chr15:55515340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs17238206[chr15:55515340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139748
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139749
chr15 55515328 55515345 ZNF410 JASPAR yes 23494501
chr15 55515335 55515345 GSC2 JASPAR yes 23494502
Genes associated with rs17238206[chr15:55515340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More