EnhancerDB
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  3. rs17242388[chr19:11206861]
Enhancers that have rs17242388[chr19:11206861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11201485 11209555 enh17921
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs17242388[chr19:11206861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11206724 11207160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849550
chr19 11206724 11207160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384526
chr19 11206747 11207407 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849551
chr19 11206747 11207407 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384527
chr19 11206773 11207037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849552
chr19 11206773 11207037 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384528
chr19 11206822 11207418 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849553
chr19 11206822 11207418 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384529
chr19 11206837 11207357 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849554
chr19 11206837 11207357 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384530
chr19 11206849 11206862 SCRT2 JASPAR yes 112455992
Genes associated with rs17242388[chr19:11206861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More