EnhancerDB
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  3. rs17252343[chr2:227514341]
Enhancers that have rs17252343[chr2:227514341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17252343[chr2:227514341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227514332 227514347 HNF1A JASPAR yes 81478556
chr2 227514333 227514346 HNF1B JASPAR yes 81478557
chr2 227514335 227514341 TBP TRANSFAC yes 81478558
chr2 227514337 227514349 IRF1 JASPAR yes 81478559
Genes associated with rs17252343[chr2:227514341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More