EnhancerDB
  1. Home
  2. SNP
  3. rs17253688[chr14:55573540]
Enhancers that have rs17253688[chr14:55573540]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17253688[chr14:55573540]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55573302 55573578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21620205
chr14 55573326 55573566 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21620206
chr14 55573513 55573874 TCF7L2 GTRD no Colon (HCT116) 21620207
chr14 55573540 55573556 POU4F2 JASPAR yes 115530564
Genes associated with rs17253688[chr14:55573540], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More