EnhancerDB
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  3. rs17288929[chr3:56852389]
Enhancers that have rs17288929[chr3:56852389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56850305 56876655 enh20643
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs17288929[chr3:56852389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56852377 56852396 RFX2 JASPAR yes 2598453
chr3 56852379 56852394 RFX5 JASPAR yes 2598454
chr3 56852384 56852400 SOX4 JASPAR yes 2598455
Genes associated with rs17288929[chr3:56852389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More