EnhancerDB
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  3. rs17364488[chr19:4971561]
Enhancers that have rs17364488[chr19:4971561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17364488[chr19:4971561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4967993 4971951 ZNF274 GTRD no Bone Marrow (K562) 108373931
chr19 4968019 4971895 ZNF274 GTRD no Bone Marrow (K562) 108373932
chr19 4968057 4971868 ZNF274 GTRD no Bone Marrow (K562) 108373933
chr19 4968337 4971772 ZNF274 GTRD no Bone Marrow (K562) 108373934
chr19 4969070 4971750 ZNF274 GTRD no Bone Marrow (K562) 108373935
chr19 4969527 4971948 ZNF274 GTRD no Bone Marrow (K562) 108373936
chr19 4969581 4972085 ZNF274 GTRD no Bone Marrow (K562) 108373937
chr19 4969602 4971988 ZNF274 GTRD no Blood (GM12878) 108373939
chr19 4969608 4971994 ZNF274 GTRD no Blood (GM12878) 108373940
chr19 4969674 4971610 ZNF274 GTRD no Blood (GM12878) 108373945
chr19 4969681 4971914 ZNF274 GTRD no Blood (GM12878) 108373946
chr19 4969716 4972050 ZNF274 GTRD no Liver (HepG2) 21842842
chr19 4969716 4972050 ZNF274 GTRD no Liver (HepG2) 108373948
chr19 4969752 4972866 ZNF274 GTRD no Blood (GM12878) 108373950
chr19 4969760 4971791 ZNF274 GTRD no Bone Marrow (K562) 108373951
chr19 4970284 4971697 ZNF143 GTRD no Epithelial (MCF-7) 21842845
chr19 4970284 4971697 ZNF143 GTRD no Epithelial (MCF-7) 108373956
chr19 4970334 4972312 ZNF143 GTRD no Epithelial (MCF-7) 21842847
chr19 4970334 4972312 ZNF143 GTRD no Epithelial (MCF-7) 108373958
chr19 4970364 4972264 ZNF143 GTRD no Epithelial (MCF-7) 21842851
chr19 4970364 4972264 ZNF143 GTRD no Epithelial (MCF-7) 108373963
chr19 4970404 4972235 ZNF143 GTRD no Epithelial (MCF-7) 21842853
chr19 4970404 4972235 ZNF143 GTRD no Epithelial (MCF-7) 108373965
chr19 4970418 4972275 ZNF143 GTRD no Epithelial (MCF-7) 21842854
chr19 4970418 4972275 ZNF143 GTRD no Epithelial (MCF-7) 108373966
chr19 4970457 4972038 ZNF143 GTRD no Epithelial (MCF-7) 21842856
chr19 4970457 4972038 ZNF143 GTRD no Epithelial (MCF-7) 108373968
chr19 4970576 4971728 ZNF143 GTRD no Epithelial (MCF-7) 21842866
chr19 4970576 4971728 ZNF143 GTRD no Epithelial (MCF-7) 108373980
chr19 4970590 4971903 ZNF143 GTRD no Epithelial (MCF-7) 21842869
chr19 4970590 4971903 ZNF143 GTRD no Epithelial (MCF-7) 108373983
chr19 4970593 4971789 ZNF274 GTRD no Blood (GM12878) 108373985
chr19 4970708 4972254 ZNF274 GTRD no Bone Marrow (K562) 108373999
chr19 4970742 4971879 ZNF274 GTRD no Blood (GM12878) 108374004
chr19 4970755 4971759 ZNF274 GTRD no Bone Marrow (K562) 108374005
chr19 4970906 4971747 ZNF274 GTRD no Liver (HepG2) 21842890
chr19 4970906 4971747 ZNF274 GTRD no Liver (HepG2) 108374019
chr19 4970931 4971910 ZNF274 GTRD no Bone Marrow (K562) 108374022
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 21842892
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 108374026
chr19 4971551 4971562 TFAP2B JASPAR yes 112200480
chr19 4971551 4971563 TFAP2B JASPAR yes 112200481
chr19 4971555 4971568 NR2F1 JASPAR yes 112200482
chr19 4971557 4971575 RARA JASPAR yes 112200483
chr19 4971559 4971563 ESR1 TRANSFAC yes 112200484
Genes associated with rs17364488[chr19:4971561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More