EnhancerDB
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  3. rs17368991[chr1:172320318]
Enhancers that have rs17368991[chr1:172320318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17368991[chr1:172320318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172320310 172320329 RFX2 JASPAR yes 33124580
chr1 172320318 172320328 GBX2 JASPAR yes 33124581
chr1 172320318 172320328 GSX2 JASPAR yes 33124582
chr1 172320318 172320328 MNX1 JASPAR yes 33124583
chr1 172320318 172320328 RAX JASPAR yes 33124584
chr1 172320318 172320329 HOXA10 JASPAR yes 33124585
Genes associated with rs17368991[chr1:172320318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More