EnhancerDB
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  3. rs1738812[chr6:47093197]
Enhancers that have rs1738812[chr6:47093197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1738812[chr6:47093197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47093189 47093201 IRF1 JASPAR yes 102000397
chr6 47093189 47093203 IRF7 JASPAR yes 102000398
chr6 47093189 47093204 IRF9 JASPAR yes 102000399
chr6 47093189 47093209 RREB1 JASPAR yes 102000400
chr6 47093190 47093210 RREB1 JASPAR yes 102000401
chr6 47093190 47093211 IRF1 JASPAR yes 102000402
chr6 47093191 47093197 TCF4 TRANSFAC yes 102000403
chr6 47093191 47093206 FOXP1 JASPAR yes 102000404
chr6 47093194 47093209 IRF9 JASPAR yes 102000405
chr6 47093194 47093214 RREB1 JASPAR yes 102000406
chr6 47093197 47093203 TCF4 TRANSFAC yes 102000407
chr6 47093197 47093209 FOXI1 JASPAR yes 102000408
Genes associated with rs1738812[chr6:47093197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More