EnhancerDB
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  3. rs1738827[chr6:47102087]
Enhancers that have rs1738827[chr6:47102087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1738827[chr6:47102087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47102083 47102093 ID4 JASPAR yes 102001752
chr6 47102083 47102093 TCF3 JASPAR yes 102001753
chr6 47102083 47102093 TCF4 JASPAR yes 102001754
chr6 47102084 47102093 SNAI2 JASPAR yes 102001755
chr6 47102085 47102090 USF2 TRANSFAC yes 102001756
Genes associated with rs1738827[chr6:47102087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More