EnhancerDB
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  3. rs17445904[chr1:90371234]
Enhancers that have rs17445904[chr1:90371234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17445904[chr1:90371234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90371234 90371242 GATA3 JASPAR yes 30632763
Genes associated with rs17445904[chr1:90371234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 89518002 89531043 - GBP1 ENSG00000117228.9 89531043 840191 Heart 0.374744 875