EnhancerDB
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  3. rs1746252[chr1:168443042]
Enhancers that have rs1746252[chr1:168443042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1746252[chr1:168443042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168442366 168443108 ZNF143 GTRD no Epithelial (MCF-7) 21348263
chr1 168443032 168443046 RXRG JASPAR yes 32929121
chr1 168443036 168443046 RORA JASPAR yes 32929122
chr1 168443037 168443048 ESRRA JASPAR yes 32929123
chr1 168443037 168443048 ESRRB JASPAR yes 32929124
chr1 168443041 168443045 ESR1 TRANSFAC yes 32929125
Genes associated with rs1746252[chr1:168443042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More