EnhancerDB
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  3. rs17466784[chr2:39733625]
Enhancers that have rs17466784[chr2:39733625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39706845 39747255 enh5443
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs17466784[chr2:39733625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39733619 39733633 FOXF2 JASPAR yes 73210003
chr2 39733620 39733631 HOXC11 JASPAR yes 73210004
chr2 39733620 39733631 HOXC12 JASPAR yes 73210005
chr2 39733620 39733631 HOXC13 JASPAR yes 73210006
chr2 39733620 39733631 HOXD12 JASPAR yes 73210007
chr2 39733621 39733631 HOXC10 JASPAR yes 73210008
chr2 39733621 39733631 HOXD11 JASPAR yes 73210009
Genes associated with rs17466784[chr2:39733625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 39892122 39945103 + TMEM178A ENSG00000152154.6 39892122 158497 Stomach 0.0457277 2299