EnhancerDB
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  3. rs17509390[chr1:114353324]
Enhancers that have rs17509390[chr1:114353324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 114344579 114353639 enh12164
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs17509390[chr1:114353324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 114353318 114353333 JUND JASPAR yes 31654047
chr1 114353322 114353332 POU6F2 JASPAR yes 31654048
chr1 114353323 114353333 GSX1 JASPAR yes 31654049
chr1 114353323 114353333 GSX2 JASPAR yes 31654050
chr1 114353324 114353332 NKX6-1 JASPAR yes 31654051
chr1 114353324 114353332 NKX6-2 JASPAR yes 31654052
chr1 114353324 114353338 POU1F1 JASPAR yes 31654053
Genes associated with rs17509390[chr1:114353324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More