EnhancerDB
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  3. rs1755594[chr1:10565488]
Enhancers that have rs1755594[chr1:10565488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1755594[chr1:10565488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10565474 10565493 PAX5 JASPAR yes 26718452
chr1 10565478 10565489 NFE2L2 JASPAR yes 26718453
chr1 10565487 10565499 PKNOX2 JASPAR yes 26718454
Genes associated with rs1755594[chr1:10565488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More