EnhancerDB
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  3. rs17613324[chr17:42180550]
Enhancers that have rs17613324[chr17:42180550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17613324[chr17:42180550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42180541 42180554 EOMES JASPAR yes 54387539
chr17 42180543 42180553 TBR1 JASPAR yes 54387540
chr17 42180543 42180554 TBX20 JASPAR yes 54387541
chr17 42180543 42180554 TBX2 JASPAR yes 54387542
chr17 42180544 42180554 TBX21 JASPAR yes 54387543
chr17 42180545 42180553 MGA JASPAR yes 54387544
chr17 42180545 42180553 TBX15 JASPAR yes 54387545
chr17 42180545 42180553 TBX1 JASPAR yes 54387546
chr17 42180545 42180553 TBX4 JASPAR yes 54387547
chr17 42180545 42180553 TBX5 JASPAR yes 54387548
Genes associated with rs17613324[chr17:42180550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More