EnhancerDB
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  3. rs17687882[chr15:42233077]
Enhancers that have rs17687882[chr15:42233077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17687882[chr15:42233077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42232678 42233274 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21651354
chr15 42232678 42233274 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108135315
chr15 42232681 42233185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651355
chr15 42232681 42233185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135316
chr15 42232771 42233147 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21651356
chr15 42232771 42233147 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108135317
chr15 42232818 42233158 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21651357
chr15 42232818 42233158 JUN UCSC Txn Factor no Conserved 108135318
chr15 42232818 42233158 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108135319
chr15 42233075 42233093 NFYA JASPAR yes 23008043
Genes associated with rs17687882[chr15:42233077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More