EnhancerDB
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  3. rs17703861[chr12:52521715]
Enhancers that have rs17703861[chr12:52521715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs17703861[chr12:52521715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52520172 52522261 P63 GTRD no Skin (Keratinocyte) 21546246
chr12 52520293 52522962 AR GTRD no Prostate (PC-3) 21546248
chr12 52520784 52522202 ZNF143 GTRD no Epithelial (MCF-7) 21546249
chr12 52520893 52521803 ZNF143 GTRD no Epithelial (MCF-7) 21546250
chr12 52520958 52521788 ZNF143 GTRD no Epithelial (MCF-7) 21546252
chr12 52520963 52521760 ZNF143 GTRD no Epithelial (MCF-7) 21546253
chr12 52521045 52523202 P63 GTRD no Skin (Keratinocyte) 21546258
chr12 52521091 52521779 ZNF143 GTRD no Epithelial (MCF-7) 21546262
chr12 52521504 52521744 ZNF274 GTRD no Blood (GM12878) 21546267
chr12 52521574 52522203 ZNF143 GTRD no Epithelial (MCF-7) 21546268
chr12 52521596 52523194 ZNF143 GTRD no Epithelial (MCF-7) 21546269
chr12 52521702 52521720 MAFF JASPAR yes 120919738
chr12 52521704 52521715 NRL JASPAR yes 120919739
chr12 52521704 52521719 MAFK JASPAR yes 120919740
chr12 52521704 52521725 MAFG JASPAR yes 120919741
chr12 52521710 52521717 JUN TRANSFAC yes 120919742
chr12 52521711 52521726 RUNX2 JASPAR yes 120919743
chr12 52521715 52521727 IRF1 JASPAR yes 120919744
Genes associated with rs17703861[chr12:52521715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More