EnhancerDB
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  3. rs1772899[chr1:95063493]
Enhancers that have rs1772899[chr1:95063493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95053805 95129570 enh12075
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 95063321 95063608 vista2556
VISTA
Transcript factors that have rs1772899[chr1:95063493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95063237 95063613 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815736
chr1 95063264 95063584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815737
chr1 95063286 95063642 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107815738
chr1 95063303 95063579 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815739
chr1 95063314 95063644 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815740
chr1 95063349 95063593 FOS UCSC Txn Factor no Conserved 107815741
chr1 95063350 95063610 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815742
chr1 95063378 95063608 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815743
chr1 95063397 95063564 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815744
chr1 95063397 95063570 CEBPB UCSC Txn Factor no Conserved 107815745
chr1 95063484 95063497 ELF3 JASPAR yes 30891925
chr1 95063484 95063497 ELF3 JASPAR yes 118333146
chr1 95063485 95063496 ELF5 JASPAR yes 30891926
chr1 95063485 95063496 ELF5 JASPAR yes 118333147
chr1 95063487 95063493 ETS1 JASPAR yes 30891927
chr1 95063487 95063493 SPI1 JASPAR yes 30891928
chr1 95063487 95063493 ETS1 JASPAR yes 118333148
chr1 95063487 95063493 SPI1 JASPAR yes 118333149
Genes associated with rs1772899[chr1:95063493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More