EnhancerDB
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  3. rs17768419[chr10:29916778]
Enhancers that have rs17768419[chr10:29916778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29894589 29921854 enh13094
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs17768419[chr10:29916778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29916769 29916784 STAT1 JASPAR yes 126333486
chr10 29916771 29916782 STAT1 JASPAR yes 126333487
chr10 29916771 29916782 STAT3 JASPAR yes 126333488
chr10 29916772 29916783 CDX2 JASPAR yes 126333489
chr10 29916773 29916784 HOXA10 JASPAR yes 126333490
chr10 29916774 29916778 H1TF2 TRANSFAC yes 126333491
chr10 29916774 29916778 NFE TRANSFAC yes 126333492
chr10 29916774 29916778 SRF TRANSFAC yes 126333493
chr10 29916774 29916783 CDX1 JASPAR yes 126333494
chr10 29916774 29916784 HOXA13 JASPAR yes 126333495
chr10 29916774 29916784 HOXB13 JASPAR yes 126333496
chr10 29916774 29916784 HOXD13 JASPAR yes 126333497
chr10 29916774 29916790 POU4F2 JASPAR yes 126333498
chr10 29916774 29916790 POU4F3 JASPAR yes 126333499
chr10 29916776 29916790 POU4F1 JASPAR yes 126333500
chr10 29916778 29916784 TBP TRANSFAC yes 126333501
Genes associated with rs17768419[chr10:29916778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More