EnhancerDB
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  3. rs17804233[chr5:77815056]
Enhancers that have rs17804233[chr5:77815056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17804233[chr5:77815056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77814956 77815219 RUNX3 UCSC Txn Factor no Conserved 108535454
chr5 77814959 77815202 EBF1 UCSC Txn Factor no Conserved 108535455
chr5 77815048 77815059 TBX2 JASPAR yes 63595727
chr5 77815049 77815059 TBR1 JASPAR yes 63595728
chr5 77815050 77815061 HOXA10 JASPAR yes 63595729
chr5 77815050 77815064 GATA2 JASPAR yes 63595730
Genes associated with rs17804233[chr5:77815056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More