EnhancerDB
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  3. rs17819000[chr15:55511858]
Enhancers that have rs17819000[chr15:55511858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs17819000[chr15:55511858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55511854 55511875 IRF1 JASPAR yes 23493936
chr15 55511856 55511871 PRDM1 JASPAR yes 23493937
Genes associated with rs17819000[chr15:55511858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More