EnhancerDB
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  3. rs17842776[chr17:49012590]
Enhancers that have rs17842776[chr17:49012590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17842776[chr17:49012590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49011964 49014278 ZNF274 GTRD no Liver (HepG2) 21771195
chr17 49012063 49013848 ZNF274 GTRD no Liver (HepG2) 21771198
chr17 49012066 49014035 ZNF274 GTRD no Liver (HepG2) 21771200
chr17 49012125 49014038 ZNF274 GTRD no Liver (HepG2) 21771202
chr17 49012132 49012688 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771203
chr17 49012207 49013855 ZNF274 GTRD no Liver (HepG2) 21771206
chr17 49012230 49012594 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771207
chr17 49012251 49014869 ZNF274 GTRD no Liver (HepG2) 21771209
chr17 49012260 49014167 ZNF274 GTRD no Liver (HepG2) 21771210
chr17 49012274 49012678 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771211
chr17 49012280 49013293 ZNF274 GTRD no Liver (HepG2) 21771212
chr17 49012300 49013855 ZNF274 GTRD no Liver (HepG2) 21771213
chr17 49012340 49013042 ZNF274 GTRD no Liver (HepG2) 21771214
chr17 49012356 49013006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771215
chr17 49012358 49013102 ZNF274 GTRD no Liver (HepG2) 21771216
chr17 49012360 49013969 ZNF274 GTRD no Liver (HepG2) 21771217
chr17 49012366 49013026 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771218
chr17 49012374 49014275 ZNF274 GTRD no Liver (HepG2) 21771219
chr17 49012380 49013924 ZNF274 GTRD no Liver (HepG2) 21771220
chr17 49012389 49013612 ZNF143 GTRD no Epithelial (MCF-7) 21771221
chr17 49012397 49013912 ZNF274 GTRD no Liver (HepG2) 21771222
chr17 49012405 49014010 ZNF274 GTRD no Liver (HepG2) 21771223
chr17 49012414 49014049 ZNF274 GTRD no Liver (HepG2) 21771224
chr17 49012427 49013092 ZNF274 GTRD no Liver (HepG2) 21771225
chr17 49012457 49013556 ZNF143 GTRD no Epithelial (MCF-7) 21771226
chr17 49012458 49013511 ZNF143 GTRD no Epithelial (MCF-7) 21771227
chr17 49012461 49013323 ZNF274 GTRD no Liver (HepG2) 21771228
chr17 49012477 49013513 ZNF143 GTRD no Epithelial (MCF-7) 21771229
chr17 49012477 49014110 ZNF274 GTRD no Liver (HepG2) 21771230
chr17 49012479 49013252 ZNF274 GTRD no Liver (HepG2) 21771231
chr17 49012487 49013788 ZNF274 GTRD no Liver (HepG2) 21771232
chr17 49012493 49013145 ZNF274 GTRD no Liver (HepG2) 21771233
chr17 49012494 49013514 ZNF274 GTRD no Liver (HepG2) 21771234
chr17 49012508 49014005 ZNF274 GTRD no Liver (HepG2) 21771235
chr17 49012518 49013325 ZNF274 GTRD no Liver (HepG2) 21771236
chr17 49012546 49013494 ZNF143 GTRD no Epithelial (MCF-7) 21771237
chr17 49012557 49013486 ZNF143 GTRD no Epithelial (MCF-7) 21771238
chr17 49012562 49013212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771239
chr17 49012573 49013083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771240
chr17 49012577 49013107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771241
chr17 49012581 49013123 ZNF274 GTRD no Liver (HepG2) 21771242
chr17 49012582 49013512 ZNF143 GTRD no Epithelial (MCF-7) 21771243
chr17 49012586 49013102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771244
chr17 49012590 49012602 TEAD1 JASPAR yes 54736079
Genes associated with rs17842776[chr17:49012590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More