EnhancerDB
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  3. rs179436[chr11:2554149]
Enhancers that have rs179436[chr11:2554149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 2550705 2561395 enh13698
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr11 2552386 2556805 vista250
VISTA
Transcript factors that have rs179436[chr11:2554149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 2554148 2554161 TFAP2A JASPAR yes 37012521
chr11 2554148 2554161 TFAP2B JASPAR yes 37012522
chr11 2554148 2554161 TFAP2C JASPAR yes 37012523
chr11 2554148 2554161 TFAP2A JASPAR yes 111901948
chr11 2554148 2554161 TFAP2B JASPAR yes 111901949
chr11 2554148 2554161 TFAP2C JASPAR yes 111901950
chr11 2554148 2554163 TFAP2C JASPAR yes 37012524
chr11 2554148 2554163 TFAP2C JASPAR yes 111901951
chr11 2554149 2554160 EBF1 JASPAR yes 37012525
chr11 2554149 2554160 EBF1 JASPAR yes 111901952
Genes associated with rs179436[chr11:2554149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More