EnhancerDB
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  3. rs179995[chr6:16319620]
Enhancers that have rs179995[chr6:16319620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs179995[chr6:16319620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16319604 16319620 ZNF143 JASPAR yes 100286846
chr6 16319611 16319624 HSF2 JASPAR yes 100286847
Genes associated with rs179995[chr6:16319620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 16299343 16761722 - ATXN1 ENSG00000124788.13 16761722 0 Pancreas 0.0191374 6179