EnhancerDB
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  3. rs180677689[chr17:80514738]
Enhancers that have rs180677689[chr17:80514738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180677689[chr17:80514738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80514731 80514739 TBX5 JASPAR yes 56374618
chr17 80514731 80514740 ZEB1 JASPAR yes 56374619
chr17 80514731 80514744 ZBTB18 JASPAR yes 56374620
chr17 80514732 80514742 ID4 JASPAR yes 56374621
chr17 80514732 80514742 TCF3 JASPAR yes 56374622
chr17 80514732 80514742 TCF4 JASPAR yes 56374623
chr17 80514734 80514739 USF2 TRANSFAC yes 56374624
Genes associated with rs180677689[chr17:80514738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 79632066 79633665 - OXLD1 ENSG00000204237.4 79633665 881073 Spleen 0.155445 16356