EnhancerDB
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  3. rs180686101[chr1:23440397]
Enhancers that have rs180686101[chr1:23440397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs180686101[chr1:23440397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23440376 23440397 IRF1 JASPAR yes 27413860
chr1 23440380 23440401 IRF1 JASPAR yes 27413863
chr1 23440384 23440398 STAT1 JASPAR yes 27413865
chr1 23440384 23440399 PRDM1 JASPAR yes 27413866
chr1 23440388 23440399 FOXC1 JASPAR yes 27413867
chr1 23440392 23440402 OLIG2 JASPAR yes 27413868
chr1 23440392 23440402 OLIG3 JASPAR yes 27413869
Genes associated with rs180686101[chr1:23440397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More