EnhancerDB
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  3. rs180706171[chr1:52098302]
Enhancers that have rs180706171[chr1:52098302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs180706171[chr1:52098302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52098298 52098308 GABPA JASPAR yes 28856735
chr1 52098298 52098311 ELF1 JASPAR yes 28856736
chr1 52098298 52098312 SPI1 JASPAR yes 28856737
chr1 52098301 52098308 SPIB JASPAR yes 28856738
Genes associated with rs180706171[chr1:52098302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More