EnhancerDB
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  3. rs180746812[chr1:204263012]
Enhancers that have rs180746812[chr1:204263012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs180746812[chr1:204263012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204263010 204263019 NF-kappaB TRANSFAC yes 34689448
chr1 204263010 204263019 NF-kappaB TRANSFAC yes 71155435
chr1 204263010 204263020 NFKB1 JASPAR yes 34689449
chr1 204263010 204263020 RELA JASPAR yes 34689450
chr1 204263010 204263020 REL JASPAR yes 34689451
chr1 204263010 204263020 NFKB1 JASPAR yes 71155436
chr1 204263010 204263020 RELA JASPAR yes 71155437
chr1 204263010 204263020 REL JASPAR yes 71155438
chr1 204263010 204263021 NFKB1 JASPAR yes 34689452
chr1 204263010 204263021 NFKB1 JASPAR yes 71155439
Genes associated with rs180746812[chr1:204263012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More