EnhancerDB
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  3. rs180761555[chr1:235123737]
Enhancers that have rs180761555[chr1:235123737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180761555[chr1:235123737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235123125 235123741 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402645
chr1 235123232 235123892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402660
chr1 235123252 235123848 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21402664
chr1 235123262 235123858 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402668
chr1 235123289 235123809 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402674
chr1 235123302 235123822 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402675
chr1 235123365 235123785 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402679
chr1 235123396 235123763 ZNF274 GTRD no Bone Marrow (K562) 21402683
chr1 235123404 235123784 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402684
chr1 235123418 235123774 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402687
chr1 235123646 235124169 ZNF274 GTRD no Liver (HepG2) 21402694
chr1 235123706 235124116 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402695
chr1 235123736 235123749 NR2F1 JASPAR yes 36338887
Genes associated with rs180761555[chr1:235123737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More