EnhancerDB
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  3. rs180780390[chr12:125204749]
Enhancers that have rs180780390[chr12:125204749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180780390[chr12:125204749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125204559 125205035 CTCF UCSC Txn Factor no Conserved 108069598
chr12 125204658 125204902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582311
chr12 125204658 125204902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069599
chr12 125204659 125204949 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21582312
chr12 125204659 125204949 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108069600
chr12 125204684 125204928 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582313
chr12 125204684 125204928 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069601
chr12 125204684 125204934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582314
chr12 125204684 125204934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069602
chr12 125204684 125204954 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582315
chr12 125204684 125204954 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069603
chr12 125204686 125204946 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582316
chr12 125204686 125204946 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069604
chr12 125204695 125204925 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582317
chr12 125204695 125204925 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108069605
chr12 125204739 125204969 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582318
chr12 125204739 125204969 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069606
Genes associated with rs180780390[chr12:125204749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More