EnhancerDB
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  3. rs180828544[chr6:25319004]
Enhancers that have rs180828544[chr6:25319004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25307668 25322997 enh38930
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Neural Stem Cells (H9) Heart
Transcript factors that have rs180828544[chr6:25319004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25319000 25319012 TAL1 JASPAR yes 100845303
chr6 25319002 25319012 NEUROG2 JASPAR yes 100845304
chr6 25319002 25319014 TAL1 JASPAR yes 100845305
Genes associated with rs180828544[chr6:25319004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More