EnhancerDB
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  3. rs180850521[chr1:1789734]
Enhancers that have rs180850521[chr1:1789734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180850521[chr1:1789734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1789731 1789743 PKNOX1 JASPAR yes 26207814
chr1 1789731 1789743 PKNOX2 JASPAR yes 26207815
chr1 1789731 1789743 TGIF1 JASPAR yes 26207816
chr1 1789731 1789743 TGIF2 JASPAR yes 26207817
Genes associated with rs180850521[chr1:1789734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More