EnhancerDB
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  3. rs180853024[chr12:125255754]
Enhancers that have rs180853024[chr12:125255754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180853024[chr12:125255754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125255436 125255812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582994
chr12 125255735 125255756 IRF1 JASPAR yes 124420325
chr12 125255740 125255761 IRF1 JASPAR yes 124420328
chr12 125255741 125255756 FOXP1 JASPAR yes 124420329
chr12 125255742 125255757 STAT2 JASPAR yes 124420330
chr12 125255745 125255766 IRF1 JASPAR yes 124420331
chr12 125255746 125255761 FOXP1 JASPAR yes 124420332
chr12 125255747 125255762 STAT2 JASPAR yes 124420333
chr12 125255750 125255771 IRF1 JASPAR yes 124420334
chr12 125255751 125255766 FOXP1 JASPAR yes 124420335
chr12 125255752 125255767 STAT2 JASPAR yes 124420336
Genes associated with rs180853024[chr12:125255754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More