EnhancerDB
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  3. rs180862590[chr1:39603532]
Enhancers that have rs180862590[chr1:39603532]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180862590[chr1:39603532]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39603521 39603532 USF1 JASPAR yes 28256701
chr1 39603521 39603532 USF2 JASPAR yes 28256702
chr1 39603522 39603532 SREBF2 JASPAR yes 28256703
Genes associated with rs180862590[chr1:39603532], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More