EnhancerDB
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Enhancers that have rs180862830[chr17:80822596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs180862830[chr17:80822596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 21800856
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312965
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312966
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 21800857
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312967
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312968
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 21800859
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 108312971
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 108312972
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 21800860
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 108312973
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 108312974
chr17 80821940 80822624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800906
chr17 80821940 80822624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313028
chr17 80821983 80822615 TCF7L2 GTRD no Colon (HCT116) 21800915
chr17 80821983 80822615 TCF7L2 GTRD no Colon (HCT116) 108313038
chr17 80822131 80822623 TCF7L2 GTRD no Colon (HCT116) 21800923
chr17 80822131 80822623 TCF7L2 GTRD no Colon (HCT116) 108313046
chr17 80822161 80822672 TCF7L2 GTRD no Colon (HCT116) 21800924
chr17 80822161 80822672 TCF7L2 GTRD no Colon (HCT116) 108313047
Genes associated with rs180862830[chr17:80822596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More