EnhancerDB
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  3. rs180889940[chr17:49002106]
Enhancers that have rs180889940[chr17:49002106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180889940[chr17:49002106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271465
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271466
chr17 48989629 49003712 ZBTB33 GTRD no Lung (A549) 108271467
chr17 48993460 49002746 ZBTB33 GTRD no Lung (A549) 108271468
chr17 48993460 49002746 ZBTB33 GTRD no Lung (A549) 108271469
chr17 48993460 49002746 ZBTB33 GTRD no Lung (A549) 108271470
chr17 48993791 49002283 ZNF274 GTRD no Bone Marrow (K562) 21770746
chr17 48993791 49002283 ZNF274 GTRD no Bone Marrow (K562) 108271477
chr17 48993791 49002283 ZNF274 GTRD no Bone Marrow (K562) 108271478
chr17 48993791 49002283 ZNF274 GTRD no Bone Marrow (K562) 108271479
chr17 48993798 49002223 ZBTB33 GTRD no Lung (A549) 108271480
chr17 48993798 49002223 ZBTB33 GTRD no Lung (A549) 108271481
chr17 48993798 49002223 ZBTB33 GTRD no Lung (A549) 108271482
chr17 48993833 49002192 ZNF274 GTRD no Bone Marrow (K562) 21770747
chr17 48993833 49002192 ZNF274 GTRD no Bone Marrow (K562) 108271489
chr17 48993833 49002192 ZNF274 GTRD no Bone Marrow (K562) 108271490
chr17 48993833 49002192 ZNF274 GTRD no Bone Marrow (K562) 108271491
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 21770758
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271537
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271538
chr17 48994501 49004321 ZNF274 GTRD no Bone Marrow (K562) 108271539
chr17 49001611 49002136 ZBTB33 GTRD no Brain (SK-N-SH) 21771048
chr17 49001782 49002451 ZNF274 GTRD no Bone Marrow (K562) 21771049
chr17 49002100 49002112 HNF1B JASPAR yes 54734723
Genes associated with rs180889940[chr17:49002106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More